MRIQC: individual T1w report

Summary

Subject ID: test01_pre.
Date and time: 2018-06-08, 16:52.
MRIQC version: 0.10.4.
Workflow details:
- Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.38078248522606023
cnr			3.4827631335870493
efc			0.6803000327819784
fber			5466.37255859375
fwhm	avg		3.15268
fwhm	x		3.08577
fwhm	y		3.31466
fwhm	z		3.05761
icvs	csf		0.21438630568987843
icvs	gm		0.43948085279615806
icvs	wm		0.3461328415139635
inu	med		1.1042420864105225
inu	range		0.17788615822792053
qi	1		0.0
qi	2		0.0015105030681887165
rpve	csf		27.96379072063179
rpve	gm		14.712228087476072
rpve	wm		22.84819551130756
size	x		196
size	y		256
size	z		256
snr	csf		1.135835287559649
snr	gm		8.59505060027374
snr	total		8.970494068994787
snr	wm		17.180596319150975
snrd	csf		24.632256322802967
snrd	gm		67.85186557465809
snrd	total		65.06755081473766
snrd	wm		102.71853054675194
spacing	x		1.0
spacing	y		1.0
spacing	z		1.0
summary	bg	k	14.94261429345115
summary	bg	mad	6.378108501434326
summary	bg	mean	12.427338600158691
summary	bg	median	7.1526689529418945
summary	bg	n	804620.0
summary	bg	p05	1.3408806204795838
summary	bg	p95	44.02834510803217
summary	bg	stdv	14.315603256225586
summary	csf	k	43.50876705232575
summary	csf	mad	144.3241729736328
summary	csf	mean	284.7021484375
summary	csf	median	239.8083953857422
summary	csf	n	8243.0
summary	csf	p05	105.00596771240234
summary	csf	p95	516.1005432128906
summary	csf	stdv	211.1167449951172
summary	gm	k	0.15305761469421864
summary	gm	mad	73.80235290527344
summary	gm	mean	661.46142578125
summary	gm	median	660.5747680664062
summary	gm	n	20195.0
summary	gm	p05	534.5671081542969
summary	gm	p95	790.630859375
summary	gm	stdv	76.85334777832031
summary	wm	k	0.40993551710976606
summary	wm	mad	55.45270919799805
summary	wm	mean	1001.053466796875
summary	wm	median	1000.0206909179688
summary	wm	n	159045.0
summary	wm	p05	907.3946044921876
summary	wm	p95	1098.7174072265625
summary	wm	stdv	58.20621871948242
tpm	overlap	csf	0.20519788563251495
tpm	overlap	gm	0.4960022270679474
tpm	overlap	wm	0.5321632623672485
wm2max			0.5318403652270616

Metadata

AcquisitionDateTime	2018-05-30T11:05:2.000000
ConversionSoftware	dcm2niix
ConversionSoftwareVersion	v1.0.20170130
EchoTime	0.003168
FlipAngle	8
ImageType	['ORIGINAL', 'PRIMARY', 'OTHER']
MagneticFieldStrength	3
Manufacturer	GE
ManufacturersModelName	DISCOVERY_MR750w
ProcedureStepDescription	BETTER_AGING
ProtocolName	anat-T1w
RepetitionTime	0.008388

Provenance information

md5sum	4d36157ed8a7ee50853a4249184073e0
software	mriqc
version	0.10.4

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.