MRIQC: individual bold report

Summary

Visual reports

BOLD average

Standard deviation map

FMRI summary plot

Extracted Image Quality Metrics (IQMs)

aor0.014432340425531915
aqi0.009699176787234042
dummy_trs1
dvarsnstd16.151003588507464
dvarsstd1.1777847070362473
dvarsvstd1.0683321233262246
efc0.3983744246832931
fber3535461.5
fdmean0.17558706536839613
fdnum17
fdperc3.617021276595745
fwhmavg2.9175172727272725
fwhmx2.9762618181818183
fwhmy3.27264
fwhmz2.50365
gcor0.0203104
gsrx-0.009430596604943275
gsry0.006495037581771612
sizet470
sizex64
sizey64
sizez37
snr4.283719618594388
spacingtr2.0
spacingx3.4375
spacingy3.4375
spacingz4.0
summarybgk100.69647579151152
summarybgmad0.9621142148971558
summarybgmean22.063199996948242
summarybgmedian0.6489361524581909
summarybgn97492.0
summarybgp050.0
summarybgp95106.80286903381347
summarybgstdv74.21936798095703
summaryfgk1.7498792544768405
summaryfgmad219.9298858642578
summaryfgmean1205.088623046875
summaryfgmedian1254.06591796875
summaryfgn23565.0
summaryfgp05628.3242553710937
summaryfgp951605.612744140625
summaryfgstdv292.74542236328125
tsnr46.039459228515625

Metadata

AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime15:46:47.000000
BodyPartExaminedHEAD
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20180622 GCC4.8.2
DeviceSerialNumber0000000319335MR2
EchoTime0.03
EffectiveEchoSpacing0.00064
FlipAngle80
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageType['ORIGINAL', 'PRIMARY', 'EPI', 'NONE']
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionNameIowa_MRRF
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerGE
ManufacturersModelNameDISCOVERY_MR750w
ModalityMR
PatientPositionHFS
PercentPhaseFOV100
PhaseEncodingAxisj
PixelBandwidth7812.5
ProcedureStepDescriptionBETTER_AGING
ProtocolNamefunc-bold_task-taskswitch
ReconMatrixPE64
RepetitionTime2
SAR0.091745
ScanOptionsEPI_GEMS_FILTERED_GEMS_ACC_GEMS
ScanningSequenceEP_GR
SequenceVariantSS
SeriesDescriptionfunc-bold_task-taskswitch
SeriesNumber8
SliceThickness4
SoftwareVersions27_LX_MR_Software_release:DV26.0_R02_1810.b
SpacingBetweenSlices4
StationNameIowa3T
TotalReadoutTime0.04032

Provenance information

md5sum75e53cc13adb403649d2bc82d9dd022c
softwaremriqc
version0.10.4

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.