MRIQC: individual bold report

Summary

Visual reports

BOLD average

Standard deviation map

FMRI summary plot

Extracted Image Quality Metrics (IQMs)

aor0.005318422174840086
aqi0.006915424626865671
dummy_trs2
dvarsnstd19.907498616367516
dvarsstd1.2386970586111106
dvarsvstd0.9760204804273508
efc0.4491084846698211
fber1834610.125
fdmean0.14802041763290222
fdnum16
fdperc3.411513859275053
fwhmavg2.8512860151515156
fwhmx2.8203869090909093
fwhmy3.352843636363636
fwhmz2.3806275
gcor0.0231363
gsrx-0.015164539217948914
gsry0.012281036004424095
sizet469
sizex64
sizey64
sizez37
snr4.298577494666297
spacingtr2.0
spacingx3.4375
spacingy3.4375
spacingz4.0
summarybgk64.84852956737862
summarybgmad1.4826022386550903
summarybgmean26.745498657226562
summarybgmedian1.0
summarybgn89543.0
summarybgp050.0
summarybgp95129.85095672607412
summarybgstdv87.96209716796875
summaryfgk2.0502747371660863
summaryfgmad223.38772583007812
summaryfgmean1335.248291015625
summaryfgmedian1364.65673828125
summaryfgn30160.0
summaryfgp05708.4263458251953
summaryfgp951801.0964233398436
summaryfgstdv317.4617919921875
tsnr57.85460662841797

Metadata

AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime15:49:11.000000
BodyPartExaminedHEAD
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20180622 GCC4.8.2
DeviceSerialNumber0000000319335MR2
EchoTime0.03
EffectiveEchoSpacing0.00064
FlipAngle80
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageType['ORIGINAL', 'PRIMARY', 'EPI', 'NONE']
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionNameIowa_MRRF
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerGE
ManufacturersModelNameDISCOVERY_MR750w
ModalityMR
PatientPositionHFS
PercentPhaseFOV100
PhaseEncodingAxisj
PixelBandwidth7812.5
ProcedureStepDescriptionBETTER_AGING
ProtocolNamefunc-bold_task-taskswitch
ReconMatrixPE64
RepetitionTime2
SAR0.0931589
ScanOptionsEPI_GEMS_FILTERED_GEMS_ACC_GEMS
ScanningSequenceEP_GR
SequenceVariantSS
SeriesDescriptionfunc-bold_task-taskswitch
SeriesNumber8
SliceThickness4
SoftwareVersions27_LX_MR_Software_release:DV26.0_R02_1810.b
SpacingBetweenSlices4
StationNameIowa3T
TotalReadoutTime0.04032

Provenance information

md5sum8b86ef8e2ae747008b591197c17e2c20
softwaremriqc
version0.10.4

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.