MRIQC: individual T1w report

Summary

Subject ID: GE120011_pre.
Date and time: 2018-07-11, 17:17.
MRIQC version: 0.10.4.
Workflow details:
- Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.39142750793042863
cnr			3.2932412055746942
efc			0.6672966253887742
fber			5498.4248046875
fwhm	avg		3.2602266666666666
fwhm	x		3.26875
fwhm	y		3.4618
fwhm	z		3.05013
icvs	csf		0.2122588756536511
icvs	gm		0.3832942587844674
icvs	wm		0.40444686556188153
inu	med		1.0884162187576294
inu	range		0.1625831127166748
qi	1		0.0
qi	2		0.0009860000276881466
rpve	csf		30.88051540003292
rpve	gm		17.17156409899193
rpve	wm		21.223691857086404
size	x		196
size	y		256
size	z		256
snr	csf		1.9866679485711585
snr	gm		8.794957747069853
snr	total		10.548411511010883
snr	wm		20.863608837391638
snrd	csf		28.582486431456264
snrd	gm		71.14631700988376
snrd	total		67.48434920537728
snrd	wm		102.72424417479186
spacing	x		1.0
spacing	y		1.0
spacing	z		1.0
summary	bg	k	3.162243035288604
summary	bg	mad	6.377738952636719
summary	bg	mean	12.61101245880127
summary	bg	median	6.380002975463867
summary	bg	n	982400.0
summary	bg	p05	1.1516818523406982
summary	bg	p95	45.447677421569814
summary	bg	stdv	14.656251907348633
summary	csf	k	8.596113667522328
summary	csf	mad	163.5350799560547
summary	csf	mean	285.9100646972656
summary	csf	median	278.2499084472656
summary	csf	n	8649.0
summary	csf	p05	103.63626098632812
summary	csf	p95	500.7473266601563
summary	csf	stdv	140.0504913330078
summary	gm	k	0.14904409787900086
summary	gm	mad	74.41886901855469
summary	gm	mean	695.4805297851562
summary	gm	median	692.60791015625
summary	gm	n	15624.0
summary	gm	p05	569.2704986572265
summary	gm	p95	832.6345214843749
summary	gm	stdv	78.748046875
summary	wm	k	0.4778043176075557
summary	wm	mad	45.91004180908203
summary	wm	mean	1000.3973999023438
summary	wm	median	1000.0183715820312
summary	wm	n	192860.0
summary	wm	p05	922.7504119873047
summary	wm	p95	1079.1132141113283
summary	wm	stdv	47.93110275268555
tpm	overlap	csf	0.19194073975086212
tpm	overlap	gm	0.46445971727371216
tpm	overlap	wm	0.5782963037490845
wm2max			0.548947939309826

Metadata

AcquisitionDateTime	2018-07-11T91:95:0.000000
ConversionSoftware	dcm2niix
ConversionSoftwareVersion	v1.0.20170130
EchoTime	0.003168
FlipAngle	8
ImageType	['ORIGINAL', 'PRIMARY', 'OTHER']
MagneticFieldStrength	3
Manufacturer	GE
ManufacturersModelName	DISCOVERY_MR750w
ProcedureStepDescription	BETTER_AGING
ProtocolName	anat-T1w
RepetitionTime	0.008388

Provenance information

md5sum	860a1608ee1db265419c9ec7e80c751f
software	mriqc
version	0.10.4

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.