MRIQC: individual T1w report

Summary

Subject ID: GE120008_pre.
Date and time: 2018-07-05, 22:19.
MRIQC version: 0.10.4.
Workflow details:
- Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.48232860079114054
cnr			2.800700664889741
efc			0.6374670159464549
fber			3243.1728515625
fwhm	avg		2.857773333333333
fwhm	x		2.90516
fwhm	y		2.92608
fwhm	z		2.74208
icvs	csf		0.21487370708420944
icvs	gm		0.4062824865434552
icvs	wm		0.37884380637233533
inu	med		1.3077361583709717
inu	range		0.21213847398757935
qi	1		0.0
qi	2		0.0018425499665888395
rpve	csf		45.23759035803709
rpve	gm		23.95839349094628
rpve	wm		31.19081166994949
size	x		196
size	y		256
size	z		256
snr	csf		3.5310413467279598
snr	gm		10.898104103406117
snr	total		10.255856264060961
snr	wm		16.33842334204881
snrd	csf		25.441701689908925
snrd	gm		43.86179606247308
snrd	total		42.90577822422558
snrd	wm		59.41383692029473
spacing	x		1.0
spacing	y		1.0
spacing	z		1.0
summary	bg	k	65.42988037988572
summary	bg	mad	11.02692985534668
summary	bg	mean	18.406999588012695
summary	bg	median	11.174779891967773
summary	bg	n	1140878.0
summary	bg	p05	1.347684508562088
summary	bg	p95	61.542008972167885
summary	bg	stdv	20.018098831176758
summary	csf	k	0.623249196025867
summary	csf	mad	91.7866439819336
summary	csf	mean	410.8308410644531
summary	csf	median	428.2220764160156
summary	csf	n	3672.0
summary	csf	p05	160.36718826293946
summary	csf	p95	578.4267822265624
summary	csf	stdv	121.257080078125
summary	gm	k	0.022323956141313772
summary	gm	mad	66.63999938964844
summary	gm	mean	738.7175903320312
summary	gm	median	738.2599487304688
summary	gm	n	9857.0
summary	gm	p05	628.2255737304687
summary	gm	p95	852.60068359375
summary	gm	stdv	67.73861694335938
summary	wm	k	0.2605199201474586
summary	wm	mad	59.616371154785156
summary	wm	mean	1000.9634399414062
summary	wm	median	1000.024169921875
summary	wm	n	92842.0
summary	wm	p05	902.3206604003906
summary	wm	p95	1103.1749877929688
summary	wm	stdv	61.206565856933594
tpm	overlap	csf	0.10920361429452896
tpm	overlap	gm	0.35089653730392456
tpm	overlap	wm	0.4188738167285919
wm2max			0.47829925459215894

Metadata

AcquisitionDateTime	2018-07-05T14:07:9.000000
ConversionSoftware	dcm2niix
ConversionSoftwareVersion	v1.0.20170130
EchoTime	0.003168
FlipAngle	8
ImageType	['ORIGINAL', 'PRIMARY', 'OTHER']
MagneticFieldStrength	3
Manufacturer	GE
ManufacturersModelName	DISCOVERY_MR750w
ProcedureStepDescription	BETTER_AGING
ProtocolName	anat-T1w
RepetitionTime	0.008388

Provenance information

md5sum	b4bccabf231229cb63f1834d4ac8a1dd
software	mriqc
version	0.10.4

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.