MRIQC: individual bold report

Summary

Visual reports

BOLD average

Standard deviation map

FMRI summary plot

Extracted Image Quality Metrics (IQMs)

aor0.005589916317991632
aqi0.003402940376569038
dummy_trs1
dvarsnstd23.188178366638656
dvarsstd1.3919014775630256
dvarsvstd1.0015409552100836
efc0.42421305188549907
fber3062732.25
fdmean0.19943976350569695
fdnum0
fdperc0.0
fwhmavg2.885304121212121
fwhmx2.805376
fwhmy3.3076363636363633
fwhmz2.5429
gcor0.0290128
gsrx-0.0059098415076732635
gsry0.006640221457928419
sizet239
sizex64
sizey64
sizez37
snr4.288507756918704
spacingtr2.0
spacingx3.4375
spacingy3.4375
spacingz4.0
summarybgk73.12626299319844
summarybgmad1.2716881036758423
summarybgmean26.442333221435547
summarybgmedian0.857740581035614
summarybgn93632.0
summarybgp050.0
summarybgp95134.332006072998
summarybgstdv78.0690689086914
summaryfgk1.3842764682464255
summaryfgmad275.1188049316406
summaryfgmean1363.6602783203125
summaryfgmedian1412.2928466796875
summaryfgn26977.0
summaryfgp05715.01171875
summaryfgp951812.0710937499994
summaryfgstdv329.3142395019531
tsnr72.3829574584961

Metadata

AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime13:16:14.000000
BodyPartExaminedHEAD
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20180622 GCC4.8.2
DeviceSerialNumber0000000319335MR2
EchoTime0.03
EffectiveEchoSpacing0.00064
FlipAngle80
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageType['ORIGINAL', 'PRIMARY', 'EPI', 'NONE']
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionNameIowa_MRRF
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerGE
ManufacturersModelNameDISCOVERY_MR750w
ModalityMR
PatientPositionHFS
PercentPhaseFOV100
PhaseEncodingAxisj
PixelBandwidth7812.5
ProcedureStepDescriptionBETTER_AGING
ProtocolNamefunc-bold_task-rest_run-1
ReconMatrixPE64
RepetitionTime2
SAR0.10054
ScanOptionsEPI_GEMS_FILTERED_GEMS_ACC_GEMS
ScanningSequenceEP_GR
SequenceVariantSS
SeriesDescriptionfunc-bold_task-rest_run-1
SeriesNumber6
SliceThickness4
SoftwareVersions27_LX_MR_Software_release:DV26.0_R02_1810.b
SpacingBetweenSlices4
StationNameIowa3T
TotalReadoutTime0.04032

Provenance information

md5sumd10c1e49b2d04f97bb7c89c8771c3ec3
softwaremriqc
version0.10.4

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.