MRIQC: individual T1w report

Summary

Subject ID: GE120006_pre.
Date and time: 2018-07-06, 21:16.
MRIQC version: 0.10.4.
Workflow details:
- Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.5356231994825592
cnr			2.5271034316659504
efc			0.6652141016293147
fber			2951.47509765625
fwhm	avg		3.1480099999999998
fwhm	x		3.10753
fwhm	y		3.34706
fwhm	z		2.98944
icvs	csf		0.24062560142093076
icvs	gm		0.39250490184244236
icvs	wm		0.3668694967366269
inu	med		1.3404819965362549
inu	range		0.21158353090286264
qi	1		0.0
qi	2		0.0003307923854950884
rpve	csf		27.033954325013188
rpve	gm		15.776660953323896
rpve	wm		20.691742922991647
size	x		196
size	y		256
size	z		256
snr	csf		2.7019347413180093
snr	gm		9.924776418504372
snr	total		8.916912047880784
snr	wm		14.124024983819972
snrd	csf		22.253611574369547
snrd	gm		46.245826749030634
snrd	total		43.818875072572176
snrd	wm		62.95718689431635
spacing	x		1.0
spacing	y		1.0
spacing	z		1.0
summary	bg	k	69.1251047722669
summary	bg	mad	10.406365394592285
summary	bg	mean	19.48990821838379
summary	bg	median	9.848752975463867
summary	bg	n	1239779.0
summary	bg	p05	1.3313297867774962
summary	bg	p95	68.82724609374992
summary	bg	stdv	23.292879104614258
summary	csf	k	-0.9163809943382342
summary	csf	mad	157.25677490234375
summary	csf	mean	340.9023132324219
summary	csf	median	353.4824523925781
summary	csf	n	13531.0
summary	csf	p05	137.23904418945312
summary	csf	p95	541.6439819335938
summary	csf	stdv	130.8208465576172
summary	gm	k	-0.03199362725707999
summary	gm	mad	73.13860321044922
summary	gm	mean	734.9228515625
summary	gm	median	734.5813598632812
summary	gm	n	14338.0
summary	gm	p05	612.6192413330077
summary	gm	p95	859.2020385742187
summary	gm	stdv	74.01232147216797
summary	wm	k	0.3378758256144443
summary	wm	mad	69.0414047241211
summary	wm	mean	1002.90185546875
summary	wm	median	1000.0291748046875
summary	wm	n	160256.0
summary	wm	p05	891.5705718994141
summary	wm	p95	1123.4819641113281
summary	wm	stdv	70.80319213867188
tpm	overlap	csf	0.1668727546930313
tpm	overlap	gm	0.43945664167404175
tpm	overlap	wm	0.5310027599334717
wm2max			0.47898623649640665

Metadata

AcquisitionDateTime	2018-07-06T13:14:39.000000
ConversionSoftware	dcm2niix
ConversionSoftwareVersion	v1.0.20170130
EchoTime	0.003168
FlipAngle	8
ImageType	['ORIGINAL', 'PRIMARY', 'OTHER']
MagneticFieldStrength	3
Manufacturer	GE
ManufacturersModelName	DISCOVERY_MR750w
ProcedureStepDescription	BETTER_AGING
ProtocolName	anat-T1w
RepetitionTime	0.008388

Provenance information

md5sum	389f363ebde3264dd53133ffb3af9621
software	mriqc
version	0.10.4

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.