MRIQC: individual T1w report

Summary

Subject ID: GE120005_pre.
Date and time: 2018-07-04, 00:18.
MRIQC version: 0.10.4.
Workflow details:
- Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.45396071358612855
cnr			3.0090573100646703
efc			0.6886828844758444
fber			2066.913330078125
fwhm	avg		2.999563333333333
fwhm	x		2.98155
fwhm	y		3.17282
fwhm	z		2.84432
icvs	csf		0.23450423936185885
icvs	gm		0.3794699773449141
icvs	wm		0.38602578329322706
inu	med		1.2834935188293457
inu	range		0.18895370364189135
qi	1		0.0
qi	2		0.0012484118543495389
rpve	csf		27.47324923786235
rpve	gm		16.554369636291998
rpve	wm		21.06540207490629
size	x		196
size	y		256
size	z		256
snr	csf		3.9265801979958077
snr	gm		9.264283353180634
snr	total		9.733686075489723
snr	wm		16.010194675292727
snrd	csf		28.1805485325708
snrd	gm		46.99776743753552
snrd	total		47.46105126702659
snrd	wm		67.20483783097346
spacing	x		1.0
spacing	y		1.0
spacing	z		1.0
summary	bg	k	3.4324460421007226
summary	bg	mad	9.7484769821167
summary	bg	mean	17.735177993774414
summary	bg	median	10.04919147491455
summary	bg	n	1126281.0
summary	bg	p05	1.1975300312042236
summary	bg	p95	61.025665283203125
summary	bg	stdv	19.648950576782227
summary	csf	k	0.7828629030590051
summary	csf	mad	88.89093780517578
summary	csf	mean	409.923095703125
summary	csf	median	419.32861328125
summary	csf	n	7112.0
summary	csf	p05	206.79354095458984
summary	csf	p95	572.38935546875
summary	csf	stdv	106.7848129272461
summary	gm	k	-0.051177726531026924
summary	gm	mad	75.27780151367188
summary	gm	mean	701.756591796875
summary	gm	median	699.3302001953125
summary	gm	n	11424.0
summary	gm	p05	578.8908325195313
summary	gm	p95	829.379736328125
summary	gm	stdv	75.4833984375
summary	wm	k	0.2632326737116544
summary	wm	mad	61.22032165527344
summary	wm	mean	1000.8721923828125
summary	wm	median	1000.0128784179688
summary	wm	n	177338.0
summary	wm	p05	900.0750396728516
summary	wm	p95	1104.711163330078
summary	wm	stdv	62.46083068847656
tpm	overlap	csf	0.1511862426996231
tpm	overlap	gm	0.4349338114261627
tpm	overlap	wm	0.5484622120857239
wm2max			0.47265343506955143

Metadata

AcquisitionDateTime	2018-07-03T13:42:38.000000
ConversionSoftware	dcm2niix
ConversionSoftwareVersion	v1.0.20170130
EchoTime	0.003168
FlipAngle	8
ImageType	['ORIGINAL', 'PRIMARY', 'OTHER']
MagneticFieldStrength	3
Manufacturer	GE
ManufacturersModelName	DISCOVERY_MR750w
ProcedureStepDescription	BETTER_AGING
ProtocolName	anat-T1w
RepetitionTime	0.008388

Provenance information

md5sum	82d1edc12baf3313c4678db8951f0672
software	mriqc
version	0.10.4

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.