MRIQC: individual T1w report

Summary

Subject ID: GE120003_pre.
Date and time: 2018-06-26, 19:14.
MRIQC version: 0.10.4.
Workflow details:
- Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.4546410473696273
cnr			2.9562433639155943
efc			0.6248391868112497
fber			4169.2646484375
fwhm	avg		3.08103
fwhm	x		3.17452
fwhm	y		3.20074
fwhm	z		2.86783
icvs	csf		0.21214215798121122
icvs	gm		0.4121120261156269
icvs	wm		0.37574581590316186
inu	med		1.1630765199661255
inu	range		0.14738860726356506
qi	1		0.0
qi	2		0.0006828069944349515
rpve	csf		37.81282722900481
rpve	gm		19.812315345355774
rpve	wm		26.887831564429046
size	x		196
size	y		256
size	z		256
snr	csf		2.0608544709074095
snr	gm		8.975662725724963
snr	total		9.123010948437866
snr	wm		16.332515648681227
snrd	csf		17.080835669659983
snrd	gm		41.01482499973897
snrd	total		38.877543741084416
snrd	wm		58.53697055385429
spacing	x		1.0
spacing	y		1.0
spacing	z		1.0
summary	bg	k	3.9667212228501683
summary	bg	mad	11.191895484924316
summary	bg	mean	18.01746940612793
summary	bg	median	10.181612014770508
summary	bg	n	1166703.0
summary	bg	p05	1.2758368492126466
summary	bg	p95	61.71914367675778
summary	bg	stdv	20.26201820373535
summary	csf	k	-0.7621680520588492
summary	csf	mad	179.31808471679688
summary	csf	mean	305.7516784667969
summary	csf	median	291.7971496582031
summary	csf	n	7176.0
summary	csf	p05	116.4550552368164
summary	csf	p95	532.0123443603516
summary	csf	stdv	141.58050537109375
summary	gm	k	-0.030734647541193816
summary	gm	mad	76.0313720703125
summary	gm	mean	701.5079345703125
summary	gm	median	700.6688232421875
summary	gm	n	11348.0
summary	gm	p05	572.3995635986328
summary	gm	p95	831.6979888916015
summary	gm	stdv	78.05974578857422
summary	wm	k	0.173799950045058
summary	wm	mad	60.05914306640625
summary	wm	mean	1000.484619140625
summary	wm	median	1000.0050048828125
summary	wm	n	130480.0
summary	wm	p05	900.6676361083985
summary	wm	p95	1101.8822631835938
summary	wm	stdv	61.22762680053711
tpm	overlap	csf	0.1813548505306244
tpm	overlap	gm	0.4705953598022461
tpm	overlap	wm	0.5684174299240112
wm2max			0.48103274408820945

Metadata

AcquisitionDateTime	2018-06-26T11:29:40.000000
ConversionSoftware	dcm2niix
ConversionSoftwareVersion	v1.0.20170130
EchoTime	0.003168
FlipAngle	8
ImageType	['ORIGINAL', 'PRIMARY', 'OTHER']
MagneticFieldStrength	3
Manufacturer	GE
ManufacturersModelName	DISCOVERY_MR750w
ProcedureStepDescription	BETTER_AGING
ProtocolName	anat-T1w
RepetitionTime	0.008388

Provenance information

md5sum	affb56b4ee804d3210a6faea61e199e3
software	mriqc
version	0.10.4

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.