MRIQC: individual T1w report

Summary

Subject ID: GE120002_pre.
Date and time: 2018-06-27, 20:54.
MRIQC version: 0.10.4.
Workflow details:
- Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.4214570468407808
cnr			3.21022503877893
efc			0.6584819458137011
fber			4331.80419921875
fwhm	avg		3.1407299999999996
fwhm	x		3.19459
fwhm	y		3.27845
fwhm	z		2.94915
icvs	csf		0.2225069034888435
icvs	gm		0.39219047764748477
icvs	wm		0.38530261886367173
inu	med		1.2521212100982666
inu	range		0.1767513990402223
qi	1		0.0
qi	2		0.0015334851572995011
rpve	csf		30.82301184269652
rpve	gm		17.65535516664164
rpve	wm		22.896598537113054
size	x		196
size	y		256
size	z		256
snr	csf		3.951415414295407
snr	gm		10.414740991813035
snr	total		10.134542911067891
snr	wm		16.03747232709523
snrd	csf		31.38433925621768
snrd	gm		53.93467107930258
snrd	total		54.11623873068863
snrd	wm		77.02970585654565
spacing	x		1.0
spacing	y		1.0
spacing	z		1.0
summary	bg	k	5.03114107431691
summary	bg	mad	8.505000114440918
summary	bg	mean	15.151142120361328
summary	bg	median	8.296157836914062
summary	bg	n	1040507.0
summary	bg	p05	1.1776734948158265
summary	bg	p95	55.189499282836906
summary	bg	stdv	17.75333595275879
summary	csf	k	0.6881480469896166
summary	csf	mad	92.91854858398438
summary	csf	mean	408.37725830078125
summary	csf	median	407.43243408203125
summary	csf	n	5679.0
summary	csf	p05	236.17490844726566
summary	csf	p95	577.4155395507812
summary	csf	stdv	103.10142517089844
summary	gm	k	0.018792156149560757
summary	gm	mad	65.6754150390625
summary	gm	mean	700.8902587890625
summary	gm	median	700.1815185546875
summary	gm	n	13622.0
summary	gm	p05	589.0026153564453
summary	gm	p95	811.9593292236327
summary	gm	stdv	67.22738647460938
summary	wm	k	0.22793380488620096
summary	wm	mad	60.68601989746094
summary	wm	mean	1000.7603149414062
summary	wm	median	1000.001953125
summary	wm	n	167068.0
summary	wm	p05	899.5802185058594
summary	wm	p95	1104.64912109375
summary	wm	stdv	62.35390090942383
tpm	overlap	csf	0.15019096434116364
tpm	overlap	gm	0.45164626836776733
tpm	overlap	wm	0.55827796459198
wm2max			0.4943125320169897

Metadata

AcquisitionDateTime	2018-06-27T11:50:43.000000
ConversionSoftware	dcm2niix
ConversionSoftwareVersion	v1.0.20170130
EchoTime	0.003168
FlipAngle	8
ImageType	['ORIGINAL', 'PRIMARY', 'OTHER']
MagneticFieldStrength	3
Manufacturer	GE
ManufacturersModelName	DISCOVERY_MR750w
ProcedureStepDescription	BETTER_AGING
ProtocolName	anat-T1w
RepetitionTime	0.008388

Provenance information

md5sum	907c31ff5019d2e7a58aed3579a42282
software	mriqc
version	0.10.4

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.