MRIQC: individual T1w report

Summary

Subject ID: GE120001_pre.
Date and time: 2018-06-22, 04:28.
MRIQC version: 0.10.4.
Workflow details:
- Detected a zero-filled frame, has the original image been rotated?

Visual reports

Zoomed-in (brain mask)

Background noise

Extracted Image Quality Metrics (IQMs)

cjv			0.45276132960474613
cnr			2.94114580715778
efc			0.687969769724123
fber			4837.060546875
fwhm	avg		3.0812566666666665
fwhm	x		3.0334
fwhm	y		3.24971
fwhm	z		2.96066
icvs	csf		0.20953791150674908
icvs	gm		0.3815414876644921
icvs	wm		0.40892060082875886
inu	med		1.1201733350753784
inu	range		0.17825686931610107
qi	1		0.0
qi	2		0.003419937341712866
rpve	csf		30.154231290201334
rpve	gm		16.925766014670252
rpve	wm		20.450612059434803
size	x		196
size	y		256
size	z		256
snr	csf		3.5351665840798554
snr	gm		10.30593428891077
snr	total		10.605118523669667
snr	wm		17.974254698018374
snrd	csf		35.47254472609722
snrd	gm		63.959793600975594
snrd	total		62.35656950061889
snrd	wm		87.63737017478385
spacing	x		1.0
spacing	y		1.0
spacing	z		1.0
summary	bg	k	3.3303872285229064
summary	bg	mad	7.475745677947998
summary	bg	mean	15.678057670593262
summary	bg	median	7.827303886413574
summary	bg	n	1049613.0
summary	bg	p05	1.353606939315796
summary	bg	p95	57.33324661254882
summary	bg	stdv	18.128150939941406
summary	csf	k	10.701422360643381
summary	csf	mad	86.01155853271484
summary	csf	mean	407.3179626464844
summary	csf	median	404.7763671875
summary	csf	n	7369.0
summary	csf	p05	217.86788635253907
summary	csf	p95	585.2352294921875
summary	csf	stdv	114.49217224121094
summary	gm	k	0.2189548883754484
summary	gm	mad	67.80245208740234
summary	gm	mean	729.8134155273438
summary	gm	median	729.8436889648438
summary	gm	n	17007.0
summary	gm	p05	612.0637573242187
summary	gm	p95	846.20498046875
summary	gm	stdv	70.81572723388672
summary	wm	k	0.27421516070361385
summary	wm	mad	54.52653503417969
summary	wm	mean	1001.0686645507812
summary	wm	median	1000.0279541015625
summary	wm	n	201115.0
summary	wm	p05	912.0075134277344
summary	wm	p95	1093.9063232421875
summary	wm	stdv	55.63654708862305
tpm	overlap	csf	0.16731996834278107
tpm	overlap	gm	0.45473551750183105
tpm	overlap	wm	0.5798317790031433
wm2max			0.528445854212463

Metadata

AcquisitionDateTime	2018-06-18T10:20:4.000000
ConversionSoftware	dcm2niix
ConversionSoftwareVersion	v1.0.20170130
EchoTime	0.003168
FlipAngle	8
ImageType	['ORIGINAL', 'PRIMARY', 'OTHER']
MagneticFieldStrength	3
Manufacturer	GE
ManufacturersModelName	DISCOVERY_MR750w
ProcedureStepDescription	BETTER_AGING
ProtocolName	anat-T1w
RepetitionTime	0.008388

Provenance information

md5sum	e04c0b5d820fed022fd78adedc782fdc
software	mriqc
version	0.10.4

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.